BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009F05LP1|AL426068
(857 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1303 1649 0.0
>3x_Contig1303
Length = 8112
Score = 1649 bits (831), Expect = 0.0
Identities = 851/857 (99%), Gaps = 1/857 (0%)
Strand = Plus / Minus
Query: 1 aatcgtggctgaaatcatctaaattgttgattgttctattggaaaagctacccattataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2485 aatcgtggctgaaatcatctaaattgttgattgttctattggaaaagctacccattataa 2426
Query: 61 cgttcagatcccttttgcgatctattttcctatactactgtataccgcgcaattcaaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2425 cgttcagatcccttttgcgatctattttcctatactactgtataccgcgcaattcaaata 2366
Query: 121 aactaccatactctgtgataagaccaattctagcaaaatccatcggtttatatccacctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2365 aactaccatactctgtgataagaccaattctagcaaaatccatcggtttatatccacctg 2306
Query: 181 aaatgccatcgatatataaagacaattacaccgcagaatcacttgaaaatatccttgtca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2305 aaatgccatcgatatataaagacaattacaccgcagaatcacttgaaaatatccttgtca 2246
Query: 241 cactttcaattcaacaattgtggaagggaaatgtgtttccaagcctgccagtgtgcgtta 300
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2245 cactttcaattcaacaattgtggaagggaaatgtgtttccaagcctgcaagtgtgcgtta 2186
Query: 301 cgatgaagactaacgatatctcagttatcttccctaatatcaatgaaaagatcgtctcta 360
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 2185 cgatgaagactaacgatatctcagtaatcttccctaatatcaatgaaaagatcgtctcta 2126
Query: 361 gattttcgttgaaccaggaagattcctggctcgataagtaaatgatagataatatacata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2125 gattttcgttgaaccaggaagattcctggctcgataagtaaatgatagataatatacata 2066
Query: 421 tagtatgttaaaatagatgacacagcccctcctaacctgattcgggtcccactatcatac 480
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2065 tagtatgtaaaaatagatgacacagcccctcctaacctgattcgggtcccactatcatac 2006
Query: 481 ccagtcgtgaaacacttttggaagactcaatttttacagacatgtctatatagatataag 540
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2005 ccagtcgtg-aacacttttggaagactcaatttttacagacatgtctatatagatataag 1947
Query: 541 aatgctctcacatatatctgtttgtcttccaggtcacattctgcaaaaaaaagtaagaga 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1946 aatgctctcacatatatctgtttgtcttccaggtcacattctgcaaaaaaaagtaagaaa 1887
Query: 601 ttgaagagaagttgaaattttgttgaagtttccattatttttgtaaaaggactgatgatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1886 ttgaagagaagttgaaattttgttgaagtttccattatttttgtaaaaggactgatgatt 1827
Query: 661 acaacagaaaacaaagagagaaggaaacatccttatagctaactactttgttaacaagct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1826 acaacagaaaacaaagagagaaggaaacatccttatagctaactactttgttaacaagct 1767
Query: 721 tttagccatcaacaaagagtagtgatatagggctgttctttgtttgagctattgaatttt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1766 tttagccatcaacaaagagtagtgatatagggctgttctttgtttgagctattgaatttt 1707
Query: 781 cctatagtgagtgagtgtttcttgttgaaaagaaaaggtgcragaaatacttccaaacac 840
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1706 cctatagtgagtgagtgtttcttgttgaaaagaaaaggtgcaagaaatacttccaaacac 1647
Query: 841 aggttttaagcttgttg 857
|||||||||||||||||
Sbjct: 1646 aggttttaagcttgttg 1630
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7878
Number of Sequences: 1807
Number of extensions: 7878
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 857
length of database: 10,358,551
effective HSP length: 16
effective length of query: 841
effective length of database: 10,329,639
effective search space: 8687226399
effective search space used: 8687226399
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)